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For instance, SIGI-HMM [ 38] identifies regions of codon usage dissimilar from comparator species and IslandPath-DIMOB [ 39] examines query sequence for the presence of flanking repeats, mobility genes, nearby tRNAs, and atypical dinucleotide sequence to identify genomic regions that were potentially acquired by horizontal transfer.
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Using automated software tools to examine queries by six million Internet users taken from Web search logs in 2010, the researchers looked for searches relating to an antidepressant, paroxetine, and a cholesterol lowering drug, pravastatin.
Instead of applying hardware tuning or traditional database tuning techniques, we examine queries by their types and properties to derive database structures that are robust at efficiently processing future queries of any type.
With its accessible web and mobile interface, users can examine queries and test hypothesis regarding genomic/proteomic alterations across a broad spectrum of malignancies.
Clicking on the hyperlinks of object genes in the alignment results window opens a search results page as shown in Figure 2A, convenient for users to examine query-related transcriptomic patterns under different conditions and proteomic information.
PSORTb uses a series of 10 Gram-positive and 12 Gram-negative analytical modules to examine a query protein.
We contrast this to earlier work by P.G.B. Enser, Journal of Documentation 51 (2) (1995) 126 170, who examined written queries for pictorial information in a non-digital environment.
During the 3 years examined, 2,943,776 queries containing at least 1 of the 5 foodborne illness related search terms included in this study were submitted to the most popular 5 Internet search engines in South Korea.
This hypothesis was examined by querying the EC numbers of the peptides (from Type1_11-81aa) (Table 2) and the EC numbers of the 'reference set' (see Methods section) proteins to which they align and developing EC number similarity profiles at each level of the EC hierarchy.
In total, (mathcal {O}((12n)^n)) different atom permutations must be examined before the query fails.
To examine whether these query languages are an appropriate tool for domain experts to filter IFC models, three sample queries are defined here and their implementation in the different languages is analyzed.
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