Sentence examples for exact alignment of the from inspiring English sources

Second, the model only takes into account the local step of homology i.e the exact alignment of the ODN with target dsDNA: indeed, this step is the only one we expect to depend on the ODN sequence.

Because the possibility of multiple insertions and deletions prevented an exact alignment of the nontranslated sequence, phylogenetic analysis was conducted with only the protein-encoding sequence.

However, the exact alignment of the OVP for any particular word is not precisely defined and may well vary between individuals or even between fixations in the same individual (Rayner, 1998).

No correction for broadening due to crystal defects was deemed necessary, due to the relatively large widths of the 200 peak, although the value will be imprecise due to a lack of certainty of sectional shape and the exact alignment of the 200 lattice in the fibrils [ 20, 25].

Because of the exact alignment of ROI to the sarcomere striation pattern is practically impossible due to continuous variations of the sarcomere orientations during contraction, the method must also be robust to the selection of ROI orientation.

Although the exact alignment of Route 50 was not specified, the state Department of Engineering had already surveyed a 35-mile (56 km) route through Cache Creek Canyon pursuant to a 1915 law, which defined the Yolo and Lake Highway "following generally, the meanderings of Cache creek" but did not make it a state highway.

The exact alignment of a series of tilted 2D images prior to the construction of the 3D image in a manner that avoids image distortion is also important for improving 3D information.

SW# could also be used as a library in all methods that use exact alignment of long sequences in one of the steps.

Thus, NBC (Rosen et al., 2011), RAIphy (Nalbantoglu et al., 2011) and PhyloPythiaS (Patil et al., 2011) rely on the alignment-free composition-based approaches (using k-mer frequencies or k-mer counts) and PAUDA (Huson and Xie, 2014) relies on the alignment-based approach and Kraken (Wood and Salzberg, 2014) on the exact alignment of k-mers.

In general, a full-length end-to-end alignment of an m bp read with at most k differences must contain at least one exact alignment of m/ k+1) consecutive bases (Baeza-yates et al., 1992).

Kraken is based on exact alignment of k-mers (a nucleotide sequence of length = k) against a user specified database of genomes and combines high classification accuracy with very fast computational processing [ 23].