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To fully understand the complexities of these problems, we must ask questions at the ultimate, or evolutionary, level of causation (Harris and Malyango 2005).
On average, the complexity of PARP repertoire increases with the evolutionary level of the species (Table 1).
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To further analyze the sequence evolutionary levels of 106 potential new va-miRNAs, these miRNAs were used as queries to search against the nucleotide sequence database in NCBI.
This allows us to predict how the evolutionary stable level of persisters depends upon population demographic parameters such as intensity of resource competition, the frequency of catastrophes such as antibiotic treatment, and the genetic structure (heterogeneity) of populations.
The general evolutionary conservation level of functional ncRNAs varies considerably among RNA classes [ 20].
For the long and short libraries, we investigated the evolutionary conservation level of each small RNA cluster and surrounding genome sequence using mean PhastCons scores [ 21] (based on genome-wide alignments of sequenced vertebrate genomes) (See Fig 2 and Methods).
At higher evolutionary levels the range of phenomena called learning is more extensive.
Note that the method currently requires that the compared trajectories have the same number of evolutionary levels (i.e. in our case the same number of species).
According to this method, the phenotypic evolution of a lineage is defined as a trajectory across a set of evolutionary levels in a multivariate morphological space.
We should note that in IEBL some evolutionary topics are left out or just incidentally treated: issues as interesting and important as speciation, sexual selection, development and genetics, organization, evolutionary stasis, levels of selection, constraints, and exaptation.
The evolutionary conservation levels of rpdA and hosA are the second and third highest among the 110 proteins related to fungal histone-modifying protein complexes, respectively [25].
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