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Rates of molecular evolution in mitochondrial genes are extremely slow in anthozoans [1], and finding informative nuclear markers is generally challenging.
Given the problems with convergent evolution in mitochondrial data [4], [5], [22], [25], we used the MVS procedure to correct the input distances for convergent evolution.
Despite much progress, many important questions remain unanswered about how these forces interact to drive molecular evolution in mitochondrial genomes.
Subtle interactions involving these intracellular microbes might have affected evolution in mitochondrial and nuclear genes of the hosts.
It is unlikely that there is any simple or absolute relationship between the patterns of evolution in mitochondrial and plastid genomes.
The studies of Eberhard et al. [ 3] and Ogoh and Ohmiya [ 21] were the first on concerted evolution in mitochondrial genomes in single species.
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No mitochondrial genome from a pseudoscorpion has previously been published, so patterns of molecular evolution in pseudoscorpion mitochondrial genomes are completely unknown.
Johnson, K. P. & Sorenson, M. D. Comparing molecular evolution in two mitochondrial protein coding genes (cytochrome b and ND2) in the dabbling ducks (Tribe: Anatini).
The overall rate of nonsynonymous evolution in Neanderthal mitochondrial protein-coding genes is not higher than in other lineages.
Although the structural and functional evidence is best in COI, there is also compelling evidence for adaptive evolution in other mitochondrial proteins early in snake evolution.
In contrast, we show here that strong adaptive evolution in snake mitochondrial proteins appears to have led to functional innovation and reorganization.
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