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Carnap's logical probability generalized the metalinguistic relation of logical implication to a numerical function, c(h, e), that expresses the extent to which an evidence sentence e confirms a hypothesis h.
The information captured included gene name, Entrez gene ID, disease, relation and evidence sentence.
We turned the evidence sentence after enrichment and translation into a bag of unique words and performed stemming.
For evidence sentence selection, the IAA results are 9.3% (strict) and 42.7% (relaxed) in F1-measures, respectively.
Furthermore, we separately characterized the source for those differences in both evidence sentence and GO term selection.
For evidence sentence selection, the inter-annotator agreement (IAA) results are 9.3% (strict) and 42.7% (relaxed) in F1-measures.
Similar(27)
It contains total 41,269 unique associations between 7,238 over- or under-expressed genes and 1,480 diseases, which are supported by 81,974 evidence sentences from 56,442 articles.
The proposed approach for the identification of TF mentions has been tested on a set of evidence sentences from the TRANSFAC and FlyTF databases.
After text classification, we got predicted evidence sentences.
via a logistic regression model to identify GO evidence sentences.
In this study, sentences containing gene entities or GO terms are considered as potential evidence sentences.
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Justyna Jupowicz-Kozak
CEO of Professional Science Editing for Scientists @ prosciediting.com