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Based on a measure which is introduced to evaluate the closeness between two nodes in the phenotype-gene heterogeneous network, we developed a Hitting-Time-based method, CIPHER-HIT, for assessing the modularity of disease gene predictions and credibly prioritizing disease-causing genes, and then identifying the genetic modules corresponding to potential subtypes of the queried phenotype.
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We calculated Spearman rank correlation coefficients (r S) to evaluate the closeness of relationship between two continuous variables.
We evaluate the closeness of protein pairs in PPI networks from BioGRID [ 42], Version 2.0.44.
In this work we develop a novel method to evaluate the closeness of proteins in a PPI network.
The sessions were videotaped, and student volunteers evaluated the closeness of the interactions.
Moreover, considering all paths between two vertices makes PageRank Affinity very robust to noise in the data, because a few extraneous or missing edges are less likely to make a big difference in evaluating the closeness of two nodes.
Then, a class of total Bregman divergences are presented to measure the closeness between HPD matrices.
The aim of the method described herein is to measure the closeness between a personal genome and a disease.
We calculated association score (AS) to evaluate the extent of closeness between the two drug sets D i and D j.
In order to evaluate the relationship between these three modalities (LC-DIA-MS, LC-IM-DIA-MS, and LC-IM-DIA-MS-MS2-High3), a statistical assessment of the closeness of fit was executed.
The closeness between the measured and predicted response, evaluated at 28.1 μm, demonstrated the validity of the statistical analyses.
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