Sentence examples for evaluate pathways from inspiring English sources

To further evaluate pathways and networks associated with the array genes, enrichment of gene ontology terms was evaluated [ 11].

Most recently, Liu et al. (2007) published a sophisticated method, called 'Gene Network Enrichment Analysis', which is similar to standard 'GSEA' and applies hypothesis testing to evaluate pathways.

Carbon-13 containing metabolites such as pyruvate, bicarbonate, and glutamine can evaluate pathways that involve lactate, hydrogen ion, and glutamine metabolism [ 56].

We used a gene-set enrichment analysis (GSEA) to evaluate pathways associated with RANK or RANKL expression using the hypergeometric probabilities as published previously [ 19].

Phenotype microarrays (PM) have been developed in order to evaluate pathways that contribute to energy production and cell sensitivity to different environmental factors, including any kind of stress, including bacterial infection.

Clinicians will order tests that evaluate pathway activity as well as mutational status and will apply these results in real-time in the clinic.

Traditionally, analytical methods like chromatography and mass spectrometry have been used to evaluate pathway variants, but such techniques cannot be performed with high throughput.

We are then able to evaluate pathway activation as a risk factor for patient survival.

To evaluate pathway based gene expression similarity measuring method, we conducted cell type classification test.

Thus, only edges significant in the training set were used to evaluate pathway activity in the validation sets.

To evaluate pathway-based classification methods, we tested predictive performances for the different methods using pathway-based markers, as described in the Methods section.