Sentence examples for estimates the expression levels from inspiring English sources

It aligns reads to potential hairpin structures in a manner consistent with Dicer processing and assigns scores that measure the probability that hairpins are true miRNA precursors; it also estimates the expression levels of the identified miRNAs.

Moreover, IDBA-Tran had similar performance to CEM in estimating the expression levels because it could reconstruct most of the expressed transcripts making the estimation process easier.

Since IDBA-Tran is designed for assembling reads to reconstruct expressed transcripts, sophisticated algorithms can be then applied to estimate the expression levels of each transcript.

We review different methodologies to estimate the expression levels of microRNAs (miRNAs) using real-time quantitative PCR (qPCR).

To estimate the expression levels of HAA1 gene in ER-6c HAA1-OP and ER-3a HAA1-OP, qRT-PCR analysis was carried out.

The reads counts were used to estimate the expression levels of miRNAs, as well as the expression levels of the isomiRs and 3′ single-nucleotide modified variants in the six libraries.

To estimate the expression levels of each transcript, all pre-processed reads were mapped into the IRGSP Build 5 pseudomolecules (http://rgp.dna.affrc.go.jp/E/IRGSP/Build5/build5.html) by BWA (version 0.5.7) with default parameters (Li and Durbin. 2009).

We exposed HeLa cells to CHX under hypoxic conditions in the presence or absence of TPZ at different time points and estimated the expression levels of HIF-1α.

Hence, we estimated the expression levels of HSP47 following incubation with the cocktail.

We estimated the expression levels of NFκB and IκBα using western blotting.

For low quality or absent signals, we run KNNImpute [ 29] to estimate the expression levels.