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The estimates deviation from the simulated parameters was used to check for bias due to the pedigree depth and/or missing genotypes.
CAI estimates the deviation from the major codon bias, as derived from a set of highly expressed genes, whereas RCBS estimates deviation from uniformity within the sequence.
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We estimated deviation from HWE per race through a Chi-squared test.
For quality control, we estimated deviation from Hardy Weinberg equilibrium (HWE) for each SNP by race.
The fractional counting strategy appears to provide the optimal estimate: deviation from the true abundance is smallest for all subfamilies.
Some indices, like the effective number of codons (Nc) or the χ statistic, estimate deviation from true uniformity in codon usage.
This model can be used to estimate deviations from the linear response regime on ET reactions in solution.
Thus, we exploited Tajima's D statistic [ 74], and Fu and Li's D* and F* tests [ 75] to estimate deviations from neutral expectations.
We estimated potential associations of calendar year, gestational age, and maternal age and parity at amniocentesis with each pollutant in generalized linear regression models with squared terms of the numerical explanatory variables to estimate deviations from linearity.
To estimate deviations from the linear scaling for the mapping stage, we calculated the average Hadoop job time multiplied by the number of successful Hadoop jobs for each Dataset S1-S9.
Genepop 4.2.2 [ 70] was used to test for linkage disequilibrium (LD) among loci in each population, using default parameters, and to estimate deviations from HWE. Significance values were adjusted for multiple comparisons with False Discovery Rates [ 71], implemented in R 3.1.0 [ 65].
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