Sentence examples for estimated expression values from inspiring English sources

(A ) Heatmap of Cuffdiff2 estimated expression values (FPKM) expressed as log2 fold-change to Day 0 for 5,100 significant protein-coding genes and 769 significant lncRNAs (q<0.001; Cufromff2) from a human H1-derived NSC differentiation timecourse.

The Cuffdiff program also reported genes showing differential splicing and estimated expression values at gene level.

Contigs were filtered based on the estimated expression values using, also packaged with Trinity, using the follow settings: ‐‐fpkm_cutoff = 0.01 ‐‐isopct_cutoff = 1.00.

> -wrap-foot> For these transcript sets, the correlation between true and estimated expression values of TP transcripts for Cufflinks is 0.95 and for Oases is 0.85 (Table 2).

Based on the estimated expression values of probes (Affy library), the expression values of corresponding Ensembl genes were obtained by BioMart.

As indicated in the previous section, for each sample we can calculate the deviation in expression against the estimated expression values calculated for each specific gene-exon pair by applying a linear regression model to the data.

After scanning and low-level quantification using Microarray Suite (Affymetrix), DNA Chip (dChip) analyzer [10] was used to estimate expression values, using the PM/MM difference model and invariant set normalization.

(v) Estimate expression values for all transcripts in the discovered set.

Each network is based on localized linear models, which estimate expression values of all the genes.

Sequence mapping data was used to estimate expression values for annotated genes using HTSeq-count 'Union' mode [ 66].

dChip was used to estimate expression values by using the perfect match/mismatch (PM/MM) difference model and invariant set normalization [ 21].