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To estimate differential exon use, significantly differentially expressed genes were discarded and differential exon expression between groups was then redetermined.
DEseq package was used to estimate differential gene expression, performing a negative binomial distribution and a shrinkage estimator for the distribution's variance and size-factor normalization [ 72].
The envelope cross-correlation method developed by Obara (2002) was used to estimate differential travel times of station pairs.
Gannon et al. (2012) already used the same technique to estimate differential flux from GOES EPEAD data.
Moreover, they used a temperature-independent grain size piezometer to estimate differential stress during natural deformation, although considerably large effects of temperature are theoretically predicted (De Bresser et al.2001; Shimizu2008,2012).
In a survey of methods that estimate differential expression, Smyth [37] showed that empirical Bayes improves specificity while having very little effect on sensitivity.
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Similarly, we estimated differential travel times and fast polarization directions for other linear arrays.
The third row reports instead the estimated differential ATE between the group aged 45 59 and the younger age group.
Recently, Heinonen and colleagues estimated differential expression time periods after stress exposure using a novel Bayesian likelihood ratio test [31].
However, relative positioning by GPS is affected by the capability of correctly estimating differential ionospheric delays, and, then, by the status of ionosphere activity.
The analyses reported the changes in means in item responses, and fitted models which estimated differential item functioning (DIF), and local dependency (LD) between items.
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