Because the mice in our experiment were kept in multiple cages and shipped to JAX West on multiple dates, we tested whether this may have introduced systematic errors ("batch effects") into our data.
Experimental noise in gene expression measurement data mainly contains two forms of experimental errors: measurement errors and batch effects.
Such extremely low %RSD was primarily attributed to automation of the analyzer, thereby avoiding human error and batch-to-batch variation.
The new iOS offering from Microsoft's mobile team employs some artificial intelligence smarts to help make sure you take the best pictures, by eliminating human error through batch captures and by enhancing image color, exposure and other variables that can make the difference between drab and dramatic for your snapshots.
For practical reasons, including the source code and model availability, error handling, batch processing capabilities and the ability to perform local database queries, we only covered in silico fragmentation software that was used for results submitted by the CASMI 2016 deadline.
Methylation bumphunting is a data analysis pipeline that effectively models measurement error, removes batch effects, detects regions of interest and attaches statistical uncertainty to regions identified as differentially methylated.
The SNPs whose cluster plots indicated possible excessive genotyping errors or batch effects were removed, the remaining SNPs were refitted to the LD model, and Bayes factors were recomputed.
We investigated the reason for this substantial difference between the single and multiple SNP test and concluded (see below) that the unusual difference between the tests was because of genotyping errors and batch effects.
Batch error f was computed by summation of all the single solutes f in one dissolution batch: F, f and f are given as the mean and SD.
Error bars for batch 1 represent duplicate analyses and are smaller than the marker size where unseen.
