Sentence examples for erroneous assembly from inspiring English sources

The remaining 53 unigenes could be a result of erroneous assembly.

We chose these features as an intuitive and comprehensive set that captures the effects of correct and erroneous assembly.

A partial alignment may occur if either the sequence scaffold or the consensus genome map is the result of a chimeric or erroneous assembly.

This is to be expected from the erroneous assembly of paralogous loci as a single locus, as merged paralogs generate shared polymorphism among populations.

All prediction methods were also benchmarked on protein fragments as they may result from erroneous assembly or wrong gene predictions common in genome projects (Brent and Guigo, 2004).

Repetitive elements, such as LINEs (Long interspersed elements), SINEs (Short interspersed nuclear elements) and LTRs (Long terminal repeats), can lead to erroneous assembly of sequences.

Repetitive sequence elements, whose multiplicity within a genome obscures the appropriate pairwise matching of flanking sequences, reveal themselves by their apparent anomalously high read coverage when considered as single-copy elements, allowing assemblers to avoid generating erroneous assemblies around them.

However, whole-genome assembly is computationally costly and can produce erroneous assemblies, which in turn might create even larger problems than aligning all reads to the reference genome.

In this case, the method is also robust with respect to erroneous assemblies because no taxonomic assignment of contigs is actually performed.

However, in addition to venom proteins, next generation cDNA sequencing also detects many non-venom components, and erroneous assemblies are another possible source of error.

The consensus sequences from each reference mapping were examined for missing nucleotide sites and for frameshift mutations, where applicable, to detect erroneous assemblies.