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This position is equivalent to position 6 according to the nomenclature in the manuscript.
Position 84 of the DPβ subunit lines pocket 1 of the DP antigen-binding site, and is equivalent to position 86 of DRβ.
The "extended gene region" of CG8316 from FlyBase (release 5.43) was downloaded; the first nucleotide is equivalent to position 1 in the following SNP designations.
Note that the position equivalent to position 439 in Shaker (Thr439) is a serine in the Kv1.2/2.1 chimera; (B ) Chemical structures of side chains at position 435 and representative currents for Trp435 (WT), Trp435Tyr and Trp435Phe (−80 mV to +20 mV, 10 mV increments).
Nonetheless, the results from the mouse model studies should be translatable to humans because the affinity and responsiveness of the mouse Ahrd gene is similar to that of the human Ahr gene: The human AHR has a valine at the position equivalent to position 375 in the mouse AHR (Moriguchi et al. 2003).
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Regardless, previous research also showed that the CMG2 S113L and V115G mutants (equivalent to positions 113 and 115 in TEM8) cause no change in protective ability [33].
Site 1, the one closest to the extracellular surface, is formed by 4 Asp carboxyl side chains, equivalent to positions Ser 196 in NaChBac and Ser 190 in NsvBa.
This may be indicative that RRH and RGR derive from the same ancestral gene which possessed introns at positions equivalent to positions 1 and 4 in RRH and RGR, even though they only share ~25% amino acid identity across the transmembrane domains compared with ≥ 40% identity exhibited between the majority of the classical opsin superfamily [ 12].
All Lhca proteins contain a glutamine to glutamate change (similarly to CP29) in equivalent positions to position 131 of LHCII, this change makes the binding of Chlorophyll b less likely at three sites (10, 12 and 13).
Like other serotype H5N1 HA proteins, all isolates possessed a conserved glutamine at position 222 (equivalent to H3 position 226) and glycine at position 224 (H3 position 228), indicating no substantial changes in avian receptor-binding specificity (Table 1) (11 ).
The position of 'Marshal' was equivalent to the position of 'Speaker' in Westminster-style parliaments.
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