By enumerating the gene sets in a forth dataset, the NKI data spotted on a custom Agilent chip, we identify gene sets that are conserved across platforms.
For purpose of presentation, in the course of enumerating the gene sets in each of the four data sets, we proceed in three steps.
By enumerating the gene sets in three data sets that use the industry standard Affymetrix U133a, we identify gene sets that are conserved across experiments on a single platform.
The gene changes were integrated into a Global Index of Dependence on Estrogen (GIDE), which enumerates the genes changing by at least twofold with therapy.
In order to quantify hop-resistance gene abundance on brewery surfaces, droplet digital PCR (ddPCR) was used to enumerate the genes horA, horB, horC, and hitA.
Conventional qPCR is designed to enumerate the gene copies of an organism in a sample, but does not identify those that originated from a viable pathogen.
To show that this is in fact the case we enumerate the gene sets in four well-studied breast cancer microarray data sets listed in Table 2.
After enumerating the potentially prostate cancer relevant genes on the commercially available cancer panel 570 potentially prostate cancer relevant genes and 451 other cancer-related genes were evaluated across both arrays.
We enumerated the number of genes that were located in clusters of two or more putative HGT genes.
