Sentence examples for entry mappings from inspiring English sources

Apart from data growth, these changes include additional annotation for singleton clusters, the identifier versioning for tracking entry change and the entry mappings between the two-level databases.

New features have been added, including the provision of an additional analysis algorithm (Phobius); new (GFF3, SVG) and improved (XML, HTML) output formats; new web services for lookup of precomputed results and the ability to infer the potential membership of proteins in pathways (via InterPro entry mappings to KEGG, MetaCyc, UniPathway, etc).

In summary, 4502 (26+1489+2987) out of 7550 SUPERFAMILY HMMs are mapped to InterPro entries, and they are all 1 1 mappings.

They depend on pairwise mappings between individual database entries provided by the data source e.g. from a protein sequence entry to the corresponding transcript, the mappings lack semantic meaning i.e. the notion that a protein is expressed from a gene can not be stated or queried.

The empirical type I error rate of association-mapping approaches based on adjusted entry means (two-step approaches) is only slightly higher than that of approaches in which the phenotypic data analysis and the association analysis were performed in one step (one-step approaches) [ 20].

UniProtKB usually merges information on alternate splice forms or polyproteins, which helped minimize this problem for our purposes, but in cases where multiple mappings exist, we selected as most informative the entry in the manually reviewed UniProtKB/SwissProt section; if no SwissProt entry was found, the longer sequence in UniProtKB/TrEMBL section was selected.

Swiss-Prot Keyword (SPKW) analysis assigns GO annotations based on mappings to keywords that are found in UniProtKB/Swiss-Prot entries (http://www.geneontology.org/external2go/spkw2go): for example, a protein whose entry contains 'antiport' would be assigned the GO Molecular Function term 'antiporter activity'.

Each table entry in these columns corresponds to the number of correct mappings.

Users could always find the alternate mappings via the iProClass related sequences link on the MPD entry page to precompiled BLAST results on all iProClass sequences.

The Transfac license prohibits us from making public the TF-motif mappings, instead, the table dataset_attr contains links to the motifs' entries on the Transfac web site.

The Gramene Mappings database models the mappings between markers (described above) and molecular maps.