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Sites of ASHM were also substantially more enriched around known imprinted genes than sites of ASM.
AuxRE/AuxRE-like with direct orientation of both coupling motifs are enriched around TSS as the other two composite elements are (Additional file 10).
While H2A.Z was sharply enriched around TSSs, the enrichments of H3.1 and H3.3 were modest.
Other terms including SMAD protein signal transduction and canonical Wnt receptor signaling pathway were also found to be enriched around the HeLa-enriched windows.
If the first motif is enriched around the peakMax there is a horizontal band of enrichment along y = 0.
If the 2nd motif is enriched around the peakMax there is a negatively sloped band of enrichment on a diagonal.
Interestingly, human miRNAs are also enriched around transcription start or end sites of RefSeq genes.
It appears that miRNAs are enriched around the transcription start and/or end sites of protein-coding genes both in human and mouse.
In mice treated with EGF-SEA, CD4+, CD8+ and SEA-reactive T lymphocytes were enriched around the EGFR expressing tumor cells.
In addition to the enrichment of Alu elements and microhomology, a sequence motif was also identified that was enriched around the deletion breakpoints.
In addition we show that miRNA genes are enriched around promoter and/or terminator regions of RefSeq genes in both mouse and human.
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CEO of Professional Science Editing for Scientists @ prosciediting.com