DASMiner API was used to create enriched data sets of histone modification data and protein interactions by accessing multiple DAS sources.
We demonstrate how to assemble enriched data sets of histone modification and molecular interaction data by accessing different DAS sources using the API.
"Their B2B intelligence layer will be able to help us enrich our data sets when we're driving sales in the enterprise market," Gura told me.
This is exhibited by scientists' intentional efforts to build on and enrich existing data sets, as shown in the following example.
For instance, between SCN and liver, genes involved in "Ubl conjugation (i.e., proteins that are post-translationally modified by the attachment of at least one ubiquitin-like modifier protein, such as ubiquitin and SUMO)" are enriched in data sets from both tissues (Tables 2 and 3).
Therefore, by imposing the presence of the ANTP-PRD pattern we hoped to enrich the data set for non-bilaterian ANTP and PRD sequences.
Nearly half of all CIN genes are essential, and the inclusion of a large essential gene SL network should dramatically enrich this data set and the number of potential targets.
BGA and RDA were used to cluster the samples and enrich the data set for tumourigenesis-related genes, with respect to single (BGA) or multiple clinical variables (RDA; details in Supporting Information).
Even though it was not possible to enrich our data set on the topology study with many additional simulations, due to simulation costs, some additional computations were performed (unpubl. data) which showed that interactions do not have null but have moderate contributions to the variation in STAR values.
Only two co-enriched categories, 'reproduction' and 'ATPase activity', were enriched in both data sets in a manner inconsistent with our motivating hypothesis, no more than expected by chance (P = 0.79).
The objective measures of height, weight and waist circumference from all participating children, as well as accelerometer measures of physical activity and sedentary behaviour and blood samples from subgroups of respondents, further enriches the data set.
