Suggestions(1)
Exact(3)
Contributions from dangling ends and terminal mismatches are excluded to keep the algorithm simple and fast.
Ref. [ 22] also relates the sequence dependence to the Gibb's free energy change to study the energetics of dangling ends and terminal base pairs in ribonucleic acid.
The frequent one-nucleotide deviation in position could be an artifact of the different handling of dangling ends and terminal mismatches.
Similar(57)
Software for topology prediction from the Center for Biological Sequences CBSS, TMHMM) indicated that the membralin is most likely a transmembrane protein with 4 6 membrane-spanning regions, containing an ER-lumen domain between membrane-spanning regions 1 and 2. Additionally, the protein has multiple glycosylation sites and cytosolic regions at both the N-terminal ends and C-terminal ends.
We also analyzed the N-terminal ends and the C-terminal ends of the proteins separately and together with the protein halves deduced from the incomplete EST contigs GCTO4WP02FNFO2.f.pc. 1and GCTO4WP02F7KNS.f.pc.1, respectively.
The AtMTP1 and AtMTP3 DNA sequences share 67.7% sequence identity, and the proteins have similar predicted secondary structure with six transmembrane domains, cytoplasmically facing N-terminal and C-terminal ends, and a histidine-rich region [ 2, 41, 42].
Meanwhile, normally the conventional HVDC system is used at the sending-end terminal and HVDC Flexible at the receiving-end terminal in the overhead line transmission system, or the conventional HVDC converter stations are converted into HVDC Flexible stations.
Several types of virus express viral proteins that possess type-I PB motifs at their C-terminal ends and bind to cellular PDZ proteins [ 58].
For type (ii) inconsistencies, interestingly, a similar tendency was observed in the 3'-end and the C-terminal regions.
SIP runs end to end, that is, it originates from and terminates in end-users' terminals.
Typically, unlike other known transposable elements, Helitrons do not contain repeats of their terminal ends and do not duplicate the host sequence upon insertion (Kapitonov and Jurka 2001).
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