The resulting encoding represents the activity profile of a compound against a specific selection of targets and can efficiently be learned by the aforementioned ranking methods.
The CSR (CSC) encoding represents a sparse (adjacency) matrix (varvec{mathrm {M}}) of a graph G by three arrays that contain nonzero values, the extents of rows (columns), and column (row) indices.
Unlike SMILES, the InChI system of encoding represents each unique structure as a unique InChI string, which makes it intuitively more appealing for use in metabolite reconciliation.
Although the colorspace encoding represents a small fraction of the whole data, of the DNA measurements which match Mycoplasma only and for which Bowtie reports (on average) three or fewer mismatches, 93% of them are colorspace encoded.
Binary encoding (BE) represents a set of permutations as a matrix of binary characters [ 9].
Since the strain-specific portions of the genomes remain largely uncharacterized, our current understanding of the metabolic functions they encode is dominated by the presence and absence of genes encoding functions represented in the iEco1339_MG1655 GEM.
In the transcriptomic analysis of E. senticosus, sequences encoding SQE represented the highest number (17) of unique sequences among transcripts associated with the mevalonate metabolic pathway, with 213 sequence reads.
To put it simply, the subinterval to be encoded is represented in the form [l, u], where l is called the base or starting point of the subinterval and u is the ending point of the subinterval.
Because the trial-by-trial manipulation of reward value was indicated to participants at the start of each trial, this value could be encoded and represented in a fully transient manner.
The percentages of S. Typhimurium 14028s chromosome-encoding genes represented by the total identified TSSs/TTSs were given.
