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Missing data were estimated using Beagle v3.3, which enables the inference of haplotypes and imputation of sporadic missing data in large-scale genotype datasets (Courtois et al. 2013).
ChemDIS utilizing chemical protein interactions from the large database STITCH 4 enables the inference of potential risks for a wide range of chemicals.
The model developed here is strictly dynamical, describing the growth of two interacting populations (species), but it enables the inference of evolution by a couple of devices.
This strategy enables the inference of combinatorial effects between TFs.
The concept of TF strength enables the inference of hierarchical or combinatorial effects amongst TFs that bind a gene promoter.
This inheritance enables the inference of GO annotations for extant sequences that have not been characterized experimentally.
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Parallel analysis of the nuclear phosphoproteome enabled the inference of the temporal activity of kinases accounting for rhythmic phosphorylation.
Alignment of a sequence to gene regions with known transcripts also enabled the inference of sequence orientation.
Both formal languages extend RDF and enable the inference of new knowledge.
Importantly, FuncISH provides semantic interpretations for similarity, enabling the inference of new gene functions from spatial co-expression.
Large-scale sequencing of genomes has enabled the inference of phylogenies based on the evolution of genomic architecture, under such events as rearrangements, duplications, and losses.
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