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Genetically determined accessibility was enriched at distal enhancers, but random monoallelically accessible (RAMA) elements were enriched at promoters and may act as gatekeepers of monoallelic mRNA expression.
To test whether any known UTR elements were enriched among genes that were translationally activated, we used the annotation provided by the UTRsite [44].
Two known elements were enriched among transcripts that were translationally activated: 5'-TOP (5'-terminal oligopyrimidine) and Mos-PRE (Mos polyadenylation response element) (Table S4).
Second, all the three types of composite AuxRE elements were enriched around TSS.
Interestingly, these elements were enriched for gene regulatory chromatin marks and many of them were associated with promoters and enhancers.
We simulated ChIP-seq and input data in triplicates for whole human chromosomes to represent scenarios in which different families of repetitive elements were enriched.
Similar(44)
Regulatory elements are enriched in low N-score regions.
Chen, S. & Li, X. Transposable elements are enriched within or in close proximity to xenobiotic-metabolizing cytochrome P450 genes.
The mass spectrometer on the Galileo probe (see above The atmosphere) showed that these heavy elements are enriched by the same factor of about three.
We summarize available data how central network elements are enriched in active centers and ligand binding sites directing the dynamics of the entire protein.
A great number of light-responsive, HY5-interacting, and circadian-responsive elements was enriched on the promoters of both structural genes and transcription factors for monoterpene biosynthesis.
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