Sentence examples for elements identified using from inspiring English sources
DNA sequences were analyzed by BlastN [ 34] and known regulatory elements identified using PLACE [ 18] and PlantCARE [ 19].
Genome locations of the 110 RpoN-dependent sequence elements identified using the PromScan analysis were cross-examined with the list of genes identified by the transcriptome analysis with a fold change cutoff of 1.25.
The elements identified using energy dispersive X-ray microanalysis appear in Figures 1, 2, 3, 4, and 5. Silicon (Si) was the main component by weight in all of the formulations (Cavex ColorChange 81.59% wt, Hydrogum 79.89% wt, Orthoprint 78.87% wt, Hydrogum 5 77.95% wt, Jeltrate Plus 66.88% wt).
When these putative, high-quality elements, identified using conserved terminal ends of the Helitron, were used as a query in a BLAST search, an additional ∼20,000 Helitrons or associated elements comprising ∼2% of the total maize genome were identified (Du et al. 2009; Yang and Bennetzen 2009a).
Ratios are based on a total of 19,406 annotated protein-coding genes Transposable elements and other repetitive elements were identified using a combination of homology, at both the DNA and protein levels, and de novo prediction.
Repeat elements were identified using a MAKER internal transposable element database, the RepBase repeat library in conjunction with RepeatMasker, and pre-computed repeats from the program CENSOR [ 33] passed to MAKER via the algorithm's GFF3-passthrough option.
The possible diurnal cis-regulatory elements were identified using the published Web-based program ELEMENT [25] (http://element.cgrb.oregonstate.edu/) for rice genes distributed over the different phases of the entire day (Table 2).
The putative cis-regulatory elements were identified using PLACE (a database of plant cis-acting regulatory DNA elements) search.
Third, to classify urban climate zones influential urban spatial elements were identified using step-wise regression analysis between air temperature and urban spatial elements.
Tandem repeat elements were identified using trf [ 57] within the RepeatModeler pipeline and the final set of predicted repeat elements were masked by using RepeatMasker (http://www.repeatmasker.org/).org/
The elemental composition of the BiVO4/TiO2(NTs NTs was also analyzed and their characteristic elements were identified using an EDX detection spectrometer.
