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The ancestral group A elements contained a 520 bp Penelope insertion (Arkhipova 2006) and a 333 bp ACA SINE.
The exception was a low copy number family MtPH-E, for which none of the elements contained a region homologous to the orf1.
In particular, the second nucleotide of the endonuclease cleavage site frequently (21.3% of elements) contained a cytosine instead of a tyrosine.
ORF prediction performed with Genscan [ 24] with the 4 complete elements showed that the putative transposable elements contained a 5 exons transcript and that the largest exon 1 was conserved in the 4 elements.
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Both elements contained an ORF and a nonautonomous variant was also recovered with 67-bp TIRs from the P. subflavus data set (nMariner1_Ps).
A vector is considered sparse if a small number of its elements contain a large proportion of its energy.
Recent promoter analysis shows that both mouse and human L1 elements contain a putative E2F/Rb binding site (5'-G/CG/CCGGC-3') within their 5'-UTR promoters [18].
The major XML schema elements contain a set of recurring standard elements, listed below.
META-C, which is not flanked by IS elements, contains a single NRPS gene, XALc_0772 (23,289 bp).
Many of these elements contain a shorter TIR, suggesting that these elements may have lost the capacity for transposition.
(C ) Treg and Teff cell-specific epigenetic elements contain a significant number of autoimmune disease-risk polymorphisms.
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