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These data suggest that these elements are under a lytic life cycle and may represent the real-time action of phages in these strains.
These findings also suggest that these prophage-like elements are under an intense mechanism of recombination of similar phages, and that mechanism can be responsible for the generation of mosaic architecture in these regions.
At present, assessment of outcome in the acute phase of sTBI is difficult and the contributing elements are under discussion.
Repetitive elements are under different evolutionary constraints as compared to genes, and are considered as fast-evolving components of eukaryotic genomes.
A third scenario is that non-autonomous elements are under strong selection to maintain their LTR sequences, because LTR sequences are important for transposition and DNA interaction.
The distribution of Rex elements in cichlid genomes suggest that such elements are under the constraining of evolutionary mechanisms that lead to their accumulation in particular chromosome regions (mostly in heterochromatins).
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While metabolism-related genes were shown to be enriched with Alu, in structural genes Alu elements are under-represented.
As such, a 3D arrangement of detector and circuit elements is under development.
While it is known that alternative 5'/3' ends create genetic variation that leads to proteome evolution [56], [57], [65], the effect of Alu elements is under appreciated.
Our data showed that more than 50% of expanded genes by these mobile elements were under expression divergence, similar to the role of segmental/tandem duplication.
Since both the PPR genes and the corresponding cis-elements are under strong negative selection, these results suggest that amino acid residues in the A helices are critical for PPR function.
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Justyna Jupowicz-Kozak
CEO of Professional Science Editing for Scientists @ prosciediting.com