Upstream sequence (UP-element) interactions with the C-terminal domains of the RNAP have also become a target for controlling gene expression.
The coordinates for each subsequent element are selected by considering the element's interactions with placed and yet-to-be-placed elements.
The best previous radiosity algorithms represented the element-to-element transport interactions with $n^2 $form factors.
Previous radiosity algorithms represented the element-to-element transport interactions with $n^2 $form factors. Visibility algorithms are given that work well with this approach.
Together, our results have demonstrated that the proximal promoter of PP2A-Aα is regulated by four major cis-elements through interactions with their cognate transcriptional factors besides the basic core promoter elements mediating interactions with the general transcription factors (Fig. 8).
Most hypotheses proposed for the different roles and temporal regulation of YY1 have pointed to external elements, like interactions with proteins that in turn are cell cycle regulated.
In prokaryotic systems, both the response to RNA sequence elements and interactions with accessory proteins are facilitated by polymerase pausing at strategic locations (reviewed in Landick 2006).
These elements—supportive interactions with others and positive affect are key ingredients in subjective well-being, life satisfaction, and happiness among people in general [ 13].
Recruitment of SYT-SSX2 to these elements by interactions with Polycomb may lead to increased acetylation of K27 by p300 resulting in their activation and subsequent perturbations in the balance between silencing and expression.
This same complex inhibits IFN γ production through binding to a negative response element and interaction with an upstream enhancer element [ 47].
The assumptions in this work are (1) the outputs of the elements in the complex system can be observed as time progresses, i.e. time series are available, and (2) the outputs are the results of internal dynamics within individual elements and external interactions with other elements.
