Sentence examples for efficiently aligned from inspiring English sources

This chapter describes the perceptual behavior of the human visual system and how this knowledge can be efficiently aligned with engineering concepts in order to design a perceptually accurate imaging pipeline.

Amino acid sequences were efficiently aligned to the Pfam profile HMM (glocal model) defined from the protease inhibitor/seed storage/LTP family [ 51] using HMMalign from the HMMER package [ 73].

Using the mapping approach, genome regions that contain a limited number of SNPs can be efficiently aligned to the reference sequence, and using paired-end sequencing, insertions and deletions can be detected.

This progressive alignment efficiently aligns multiple sequences with reasonable accuracy.

We used BWA [ 35], which performs a backward search with burrows wheeler transform and efficiently aligns short reads against reference sequences.

Contact: [email protected] The Nearest Alignment Space Termination NASTtoolool (DeSantis et al., 2006b) was developed to efficiently align thousands of 16S rRNA genes using an alignment compression algorithm to create multiple sequence alignments (MSAs) with a set number of columns.

Results: We implemented Burrows-Wheeler Alignment tool (BWA), a new read alignment package that is based on backward search with Burrows Wheeler Transform (BWT), to efficiently align short sequencing reads against a large reference sequence such as the human genome, allowing mismatches and gaps.

Finally, TARGOMICs could efficiently align and compute proportions of methylated cytosines from bisulfite-converted DNA from targeted NGS.

That's why Whitaker encouraged the Bronx students to try something simple: Tutor some younger kids in the neighborhood, walk instead of transit, use water more efficiently, align school assignments -- reading and writing -- with one's bigger global agenda and mission (as Whitaker is doing for his thesis at New York University).

For reads shorter than 60 bp, the flanking sequence would be too short to accurately and efficiently align using BLAT, so the Assembly mode must be used.

These data can also help hospitals to more efficiently align interventions designed to reduce adverse outcomes after hospital stay to the highest risk periods for patients.