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Efficient string matching algorithms are therefore important for identifying theSe packets at line rate.
This paper presents a memory and time efficient string matching algorithm specifically designed for NIMS on commodity processors.
The research work presented in the paper describes a efficient string based methodology to process "data streams" and control the challenges of infinite-length, concept-evolution and concept-drift.
This polynomial time complexity is achieved by manipulating a discretized version of the original matrix using efficient string processing techniques.
The polynomial time complexity is obtained by manipulating a discretized version of the original expression matrix and by using efficient string processing techniques based on suffix trees.
In this section we propose e-CCC-Biclustering, an algorithm designed to find and report all maximal CCC-Biclusters with approximate expression patterns (e-CCC-Biclusters) using a discretized matrix A and efficient string processing techniques.
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The core is Mgrep, a concept mapping engine based on an efficient string-matching algorithm.
This is the approach proposed by the NCBO annotator (12), which applies an efficient string-matching algorithm (Mgrep) to find these synonyms inside the text, supplying higher speed, precision, flexibility and scalability than NLP-based annotators (17).
By default, spectra from MS file formats (mzXML and mzData) are decoded into memory-efficient strings and are only completely cast when spectral information is accessed.
For the last three options, the user can provide the patient's key clinical features (phenotype) to refine the search, using Boolean operators "AND," "OR," and "NOT" to formulate an efficient search string from the "OMIM Clinical Synopsis".
Furthermore, instead of considering all sequences of particular length, also known as k-mers, as has been done earlier for other tasks and by Maillet et al. (2012), we employ an efficient distributed string mining (DSM) algorithm to find informative subsequences that can be of any length.
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