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Only those SNP allele frequency estimates with sample sizes over 15 or more individuals in each population were analyzed.
Two to six individuals from each population were analyzed.
On average, two to three individuals from each population were analyzed.
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However, no pooling lends itself to "embarrassingly" parallel computation, because each population is analyzed independently.
Once the monocyte population was evaluated with CD14 and CD16, each population was analyzed for the surface expression of TM and TF.
In 2007, a bulk of five seeds from each RIL in each population was analyzed to obtain fatty acid profile for the Costa Rica location.
Each population was analyzed separately using a full-likelihood (FL) method, with a high-likelihood precision and a medium-length run.
Fatty acid phenotypic data were organized into genotypic categories based on the allelic status at SAPCD-C and each population was analyzed using JMP version 9 statistical software (SAS Institute).
To determine the cellular populations responsible for the increased expression of iNOS and cytokines in the MCMV-infected fetal cerebra, four cell populations, monocyte/macrophages, microglia, CD11b− leukocytes, and other cerebral cells, were prepared by cell sorting during flow cytometry, and the expression of iNOS and cytokines in each population was analyzed (Fig. 10).
Next, the AAFREQ outputs for each peptide population were analyzed for position-specific amino acid biases.
Percentages of each lymphocyte population were analyzed by 100,000 unique events using FlowJo software (Tree Star, Inc., OR, USA).
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