Sentence examples for duplication regions from inspiring English sources

Among the large number of tandem gene duplication events in the P. carnosa genome, the largest tandemly duplicated gene family is P450 with 38 duplication regions resulting in 80 genes, while corresponding numbers in the P. chrysosporium genome are 15 and 23 (Additional file 1: Table S13).

We used microarray based comparative genomic hybridisation (aCGH) to investigate structural differences in the genomes of the two strains and identified seven distinct regions of the S. japonicum genome that present differential aCGH representing either deletion or duplication regions in SjP.

According to the duplication regions of rice chromosomes, we found that seven genes (OsOPT2, OsOPT3 and OsOPT4 in section A2, OsYSL12 and OsYSL13 in section B1, OsYSL2 and OsYSL15 in section B2) came from gene tandem duplication, which were shown in the box in Figure 3.

All of these strains have two duplicated segments (25kb in length in strain 2038), while there is an unique central region (8.5kb) between the duplication regions in Lb. bulgaricus 2038 (Figure 2).

This may, to some extent, reflect bias in the selection of CNVs sequenced in these studies for instance, simple deletions are likely to be more amenable to amplification by PCR than the more complex rearrangements observed in some segmental duplication regions.

Only 106 of the SNPs in our study mapped within known segmental duplication regions and a test showed that SNPs presenting ASGE are not more likely to be located inside SDs than SNPs without ASGE (Table 5), even if the lack of statistical significance may be an effect of small sample size, as we will see below.

A diversity analysis of the s6pp duplication region revealed haplotype-structured sequence composition.

The miR-1302 gene and the neighboring genes in each duplication region are shown in Additional file 5.

Thus, the phylogenetic relationship and genomic location of these V1r genes, that are located in the segmental duplication region, could help us to better understand the segmental duplications.

We have focused on haplotypes outside the duplication region, to analyze diploid genotypes, and limited the analysis to regions of high LD where haplotypes could be phased.

It should be noted that primer PI4KA-43F was designed specifically so it binds to an exon located outside the segmental duplication region.