However, an ancestral duplication was apparent in three of the gene pairs.
EF-G is the most duplicated trGTPase in bacteria, with at least eight duplications being apparent.
Eight duplications were apparent within the Anaeromyxobacter strains (highlighted in Additional file 3).
Subsequent duplications are apparent in both lineages, but the group is particularly expanded in eudicots where at least three subclades exist.
Deletions and duplications are apparent by a 35 50% variation of relative peak area of the amplification product of a given probe in comparison to the relative peak area of the same probe for the control samples.
Defensin duplications are apparent in many insect species, including wasps (Gao and Zhu 2010), termites (Bulmer and Crozier 2004), ants (Zhang and Zhu 2012), and mosquitoes (Dassanayake et al. 2007), and we cannot exclude the possibility that transcripts from recently duplicated loci may have been collapsed during assembly, leading to an underestimation of copy number throughout the assembly.
With the duplication of the TACC1/TACC2 ancestor, it is apparent that an even greater functional diversity may have been introduced into the TACC family.
A duplication event deep enough in the tree to explain the two Aegilops outliers as paralogs (i.e., a basal duplication) should be apparent in most, if not all, of the genera.
The camaraderie is apparent.
In addition to these duplications which are apparent in the human genome assembly, it appears, from two independent studies [ 36, 12], that the region of human chromosome 1 (HSA1) containing these PRAME genes is copy number polymorphic.
However, multiple examples of gene losses soon after duplication are also apparent.
