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Index structures are generated to store analysis results that may be interesting to other users, so that the results are readily available without duplicating the analysis.
I was going to write a big ol' thing on this, but the fact is that I'd just be duplicating the analysis over at Brainstorm Tech and Daring Fireball.
The robustness of our results to the tree topology is examined later, by duplicating the analysis using the ML tree under the GTR+G model (PhyML) [21].
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We duplicated the analysis using WinBUGS [ 27], a Bayesian modeling program that uses Markov chain Monte Carlo computing.
In addition, raw data was exported to Excel and an in-house macro was used to duplicate the analysis.
42 50622 106 108 117 120 Attempting to extrapolate a composite score for the individual studies would have essentially duplicated the analysis on respiratory distress syndrome.
To compare more directly with the formal analysis, I generated another figure for 2000 using the standard functions, exactly duplicating the 2001 analysis using the raw data.
In order to avoid duplicates in the analysis, probes representing the same gene symbol in Illumina™ data were replaced with their average intensity before applying the GSEA.
We used the mean of the duplicates in the analysis.
All experiments were performed in duplicates, and the analysis was carried out at least three times for each sample.
Although duplicate reporting was considered highly unlikely because of the use of a structured questionnaire and because we excluded suspected duplicates from the analysis, we cannot entirely rule out the possibility of over-reporting.
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Since I tried Ludwig back in 2017, I have been constantly using it in both editing and translation. Ever since, I suggest it to my translators at ProSciEditing.

Justyna Jupowicz-Kozak
CEO of Professional Science Editing for Scientists @ prosciediting.com