Sentence examples for duplicated locally from inspiring English sources

This sequence seems to have duplicated locally in C. elegans to form three copies (denoted a - c).

A low-copy sequence that is duplicated locally might be an obstacle that would be hard to overcome whereas a transposable element that has 10,000 copies in the whole genome might not pose any problem if only a single copy would be present on the BAC clone of interest.

Segmental duplication in similar or inverted orientation can also be modeled through double-strand break (DSB) repair or replication slippage, as illustrated (4 in fig. 4) for a cluster of two tandem genes in rice that has been duplicated locally (highlighted in red), with the same relative orientation.

For locally duplicated ohnologs, local duplications have significantly smaller Ks than ohnolog pairs in both Arabidopsis and rice (P value ≤ 1.875 × 10−6, two-sample t-test), suggesting that local duplications are relatively younger than WGDs, which is consistent with previous studies (Blanc and Wolfe 2004b; Yu et al. 2005).

To detect locally duplicated ohnologs, local gene duplications, defined as two duplicated genes within 20 annotated genes of each other on the same chromosomes without any paralog (BLASTP hit) between them, were identified.

In two representative angiosperm genomes, Arabidopsis (Arabidopsis thaliana) and rice (Oryza sativa), we identified the ohnologs that were also locally duplicated, which were named locally duplicated ohnologs (the remaining ohnologs were named nonlocally duplicated ohnologs).

In other situations, part of a cluster duplicates locally, such as miR-302.

We entered all data in duplicate locally and verified them by using Epi-Info software version 6.04d.

To ensure reliable comparison, the divergence of duplicates in the best duplicate pairs between the syntenic positions defined by locally duplicated ohnolog pairs and the local duplications of ohnologs was also assessed.

If at least one ohnolog in an ohnolog pair was locally duplicated, this ohnolog pair was deemed a locally duplicated ohnolog pair.

When all local duplicates were used as the reference database, there were no enriched GO terms in Arabidopsis locally duplicated ohnologs but 21 enriched GO terms in rice locally duplicated ohnologs (supplementary table S3, Supplementary Material online).