Sentence examples for duplicate segments from inspiring English sources
Gene duplication is a prominent feature of plant genome evolution, and duplicate segments account for 60% of the Arabidopsis thaliana genome [ 35].
Finally, G is reduced by removing all nodes contained in representing alignments of the removed child duplicate segments.
To keep track of the one or more duplicate segments each sd_segment has, we defined a property is_sd_pair_of.
Within the duplicate segments containing the ats1A and B genes, the latter were among several examples of tandem arrays, others including LRK10L receptor-like Ser/Thr kinases [ 60].
It is worth noting the possibility of other scenarios, for example, the orginating pseudogene may be located on a third duplicate segment distinct from that of the duplicated pseudogene and the parent gene.
Once the parent daughter relationship is identified, the child duplicate segment is removed from the alignments (i.e., the duplication event is "rewound").
It then looks at the distance from start of the features on the duplicate segment.
Rule 7 handles Case 2 by comparing the alignment of the pseudogene and its parent gene with the alignment of the pseudogene and the other pseudogenes on the duplicate segment.
The reason is that the rate-limiting step in FN3 switching appears to be an unfolding dissociation event (displacement of the duplicate segment in FN3BN) rather than a binding or folding reaction as in most cases.
Phylogenetic trees for duplicated genes (so-called anchors) in duplicated segments were based on pairs of grape paralogs representing the reciprocal best hits with aligned length of >150 amino acids and considering comparisons with proteins from Physcomitrella patens, used as outgroup, and the best Arabidopsis homolog.
However, this trend is not reflected in relatively higher MegaBLAST scores for these sequences and is also complicated by uncertainty in defining the precise starts and ends of duplicated segments and the presence of, apparently, multiply duplicated segments.
