SNPs with conflicting duplicate calls from the same source were removed.
Intra-tool merging: Potential duplicate calls generated by the same tool are merged here.
MetaSV proceeds in the following steps (Fig. 1): Intra-tool merging: Potential duplicate calls generated by the same tool are merged here.
Genotyping quality was evaluated using a detailed quality control procedure that consisted of a >95%% successful call rate, duplicate calling of genotypes, internal positive control samples and Hardy-Weinberg Equilibrium (HWE) testing.
Genotyping quality was examined by a detailed quality control procedure consisting of >95% successful call rate, duplicate calling of genotypes, internal positive control samples and Hardy-Weinberg Equilibrium (HWE) testing.
Genotyping quality was examined by a detailed QC procedure consisting of > 95% successful call rate, duplicate calling of genotypes, internal positive control samples and Hardy-Weinberg Equilibrium (HWE) testing.
In contrast, myosin-11E3 duplicates (called Myo11E4) have been found in all sequenced species of the Poales clade and are supported by EST/cDNA data for several of the species.
These findings led to the idea that, after genome duplication, duplicated genes (called ohnologs when originating in a genome duplication) are redundant, so some of their ancestral functions like expression domains, protein functional domains, or protein quantities can reciprocally degenerate.
For transcripts consisting of a single exon, it may be difficult for Cufflinks to predict the correct strandedness of transcript, and the pipeline may generate complementary-strand duplicate gene calls by calling the inferred transcript twice, on each of the complementary strands to which RNAseq reads align.
Judge Simon Cowell told the Daily Mirror he "felt like a bit of an idiot" when he found out a duplicate dog, called Chase, had performed the tightrope trick.
