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The duplex containing a single unpaired RNA nucleotide (1/7) is less stable than 1/2, but more stable than the duplex containing double unpaired RNA nucleotides (1/8).
The structure of DraIII was determined in the presence of an 11-bp canonical DNA duplex containing a phosphorothioate at both of the scissile phosphodiester bonds (Fig. 3B).
In the absence of magnesium ions a duplex containing this UCU bulge is destabilized and a single, shorter duplex is formed.
An X-ray crystal structure of the K86R/G100T mutant protein bound to a DNA duplex containing the C G+4 substitution suggests how sequence specificity of a homing enzyme can increase.
The electrode surface was firstly modified with Au nanoparticles (AuNPs -loaded Fe3O4 nAuNPs -loaded (AuNPs@Fe3O4) ananocompositesx contAuNPs@Fe3O4candure probe (NH2-CP) with two specific toehold sequences.
Heteroduplex patches are a stretch of duplex containing strands from different parental DNA molecules.
Incubation of an αdAT34 duplex containing a single αdA residue in the presence of APE1, FEN1, POLβ and LIG1 generated a full length oligonucleotide free of αdA (Figs. 6 and 8).
Finally, in 2002, Zhou et al. described the interaction between the M.HhaI and a short duplex containing zebularine [28] by X-ray crystallography observing the formation of a covalent bond between the enzyme and zebularine.
Taylor et al. reported the formation of a covalent link between a short DNA duplex containing deoxyzebularine and M.MspI [27], showing however that these complexes are not as stable as those observed with a DNA containing 5-F-CdR 5-F-CdR 5-F-CdR
At the adducted base pair, the base stacking of the duplex containing cyclic hemiacetal 8 was improved as compared to that of the duplex containing cyclic hemiacetal 10.
The retina of the Australian lungfish is duplex, containing both rod and cone photoreceptors.
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