The ratio of C. clemensi total abundance between upstream and downstream categories was estimated by this model at 2.80 with 95% confidence intervals of 1.03 and 7.68.
No significant correlation signal was found for the downstream-antisense category.
We used MeV to identify genes significantly up- or down-regulated within four downstream GO categories: cholesterol metabolism, FA metabolic process, regulation of FA metabolic process, and FA biosynthetic process.
This was accompanied by overexpression of genes belonging to "hormone secretion," a category downstream of "response to extracellular stimulus," suggesting the presence of putative self-regulating ligand-receptor interactions that operate in human airway basal cells in a cell-autonomous manner.
(C ) Fraction of differentially expressed (DE) genes in multiple categories downstream of REX1 in human and mouse ESCs.
The remainder of the InDels were located outside the genic regions and constituted the intergenic (~50 %) and 1 kb up- or downstream (2.7 %) categories (Table 2).
51 OPCs are expected to be potent suppressors of expression or activity of genes in the melanogenic, inflammatory, and arachidonic acid-synthesizing categories downstream of Nrf2.
At Salem (RM 84, RK 135), the score was 89, and good scores continued all the way to the Hawthorne Bridge in Portland (RM 13, RK 21) at 85. Scores were in the "fair" category further downstream; the least favorable reading was at the Swan Island Channel midpoint (RM 0.5, RK 0.8) at 81.
Folliculin interacting protein 1 (Fnip 1), which we functionally classified in the signaling category, is downstream in the signaling cascade initiated by activated AMP-activated protein kinase (AMPK) [36].
We chose the longest sequence in each category for downstream phylogenetic analysis.
