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The dominating gene clusters correspond to well known operons, in particular the str locus containing the S10, spc and alpha operons.
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One group (the "agonists") is dominated by members of the miR-17 gene clusters, the other (the "antagonists") contains miR-221 and miR-222.
The agonist miRNAs that we found to correlate with a large number of oncogenic gene signatures were dominated by members of the three miR-17 gene clusters (Additional file 5: Figure S3).
Although HRV-C strains belonging to different gene clusters cocirculate, some genetically close strains dominated during certain periods, e.g., the C025-like strain (6/14) was dominant during the study period.
This medium-sized family is dominated by three large gene expansions in C. elegans, mostly in gene clusters in several places on chromosome V (Additional file 17).
(d) Evolution of orthologous gene clusters.
Identification of novel gene clusters for cell survival.
Dispersal of NK homeobox gene clusters in amphioxus and humans.
Evidence for 14 homeobox gene clusters in human genome ancestry.
These alignments come from 3268 orthologous gene clusters with each cluster carrying single copy genes from at least 9 (50%) species.
However, the lom and fls gene clusters lack genes encoding P450 enzymes.
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