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This can be supported by good documentation of the software.
In other words, they want clear documentation of the software's functions and how the software was tested for failure modes.
Computational studies should cite the model documentation of the software that was used, and provide the values of all relevant compiler and installation options and input parameters.
JXZ identified the potential utility of HMMs for name and address standardisation and assisted in the documentation of the software package.
Despite considerable efforts we were not able to generate estimates of affinities of metal-ions to proteins using the commands described in the documentation of the software; we suspect that the option in those versions of the software is dysfunctional.
The Biomolecular Network Simulator software was developed to allow for stochastic simulations on either desktop or multi-processor hardware (see age: for complete documentation of the software and to download the software).
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Users who have special interests and expertise are invited to participate in the NEURON project by helping to organize future meetings of the NEURON Users Group, and by participating in collaborative development of documentation, tutorials, and software.
While the papers describe the method, complete documentation of the project is best achieved by providing the software used to perform the analysis, documentation of that software, and summary results from the analyses.
The marketing person from the product team writes or oversees the writing of the user documentation for the software.
Stanford users have access to the latest version of the software, documentation for the software, plus a related software package called AxPyMOL (Win only) that lets users insert PyMOL images into PowerPoint presentations.
But in organizations where management delegates all the technical details to IT employees or contractors, there is a danger of those people leaving behind no documentation of how the software works, or how the network is wired.
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