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Rigid receptor was used as a docking approach.
We herein carried out a large-scale docking approach using 650 different kinase crystal structures.
Both are introduced in our descriptor-based docking approach named TrixX [1].
In a pharmacophore-based docking approach the structure activity relationship was evaluated.
This has been at the core of our information-driven docking approach HADDOCK.
We then checked whether the molecular docking approach reflected the various conformations of kinases and yielded reliable docking results.
Our protein-ligand docking approach GOLD [1, 2] has been extended to search such conformational ensembles time-efficiently.
Computational analysis based on a molecular docking approach underlined the potential structural requirements for simultaneously targeting both proteins' allosteric sites.
In the present study, a flexible molecular docking approach was conducted to investigate different binding modes of twelve phosphorus enantiomers.
The practical example of molecular docking approach as a generic tool in SBDD of is also demonstrated.
Here, we investigate the energetics of glycan recognition using a computationally inexpensive flexible docking approach, backbone perturbation docking (BP-Dock).
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