Sentence examples for dock spheres from inspiring English sources

The docking site points can either be generated from standard DOCK "spheres" or can be based on the positions of atoms in crystallographic ligands.

These residues were subsequently tested by using different docking spheres.

One of the used docking spheres of the (α4 3 β2)2-TMD model includes α4-Leu235 α4-Leu2359, α4-Leu239, and α4-Leu249 α4-Leu249ed to be important residues by the NMR results (see Table 1).

Similarly, a docking sphere in GOLD has a radius of 15 Å and it is centered at the position of selected ligand atoms, whereas FRED requires the box size to be expanded to 14,000 Å3 based on the coordinates of co-crystallized ligands [42]; these default parameters can be changed by a user.

It was planned that the station's core module (DOS-7 and the backup DOS-8) would be equipped with a total of four docking ports; two at either end of the station as with the Salyut stations, and an additional two ports on either side of a docking sphere at the front of the station to enable further modules to expand the station's capabilities.

Unless otherwise specified, docking sphere with the radius of 30 Å was placed on the OH atom of the Tyr22 residue near the center of the convex side of CT 4. As a result, almost all the surface of the CT molecule was accessible to the ligand binding.

The second docking sphere includes residue β2-Lys260 β2-Lys260e NMR experiments indicated whichmporthet.

The third docking sphere includes α4-Leu235 α4-Leu235 and β2-Ile287, which the NMR experiments for each enantiomer indicated were residues.

The fourth docking sphere includes residue β2-Thr449 β2-Thr449 which wat significanTM4 affected by (S)--mecamylamine during the NMR experiments.

The last docking sphere at the (α4 3 β2)2-TMD stoincludesry includes α4-Thr296, considered to be important by the NMR experiments.

The first docking sphere includes residues α4-Gly244 α4-Gly244y238, which the NMR experiments indicandd were important (Table 1).