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DNA sequencing data was aligned manually using Sequencer 4.7 software (Gene Codes Corporation).
In order to correctly interpret the quality of the DNA sequencing data, however, proper quality control should be conducted at all stages of DNA sequencing data analysis: raw data, alignment, and variant detection.
McKenna, A. et al. The Genome Analysis Toolkit: a MapReduce framework for analyzing next-generation DNA sequencing data.
DNA sequencing data are available at the European Nucleotide Archive ENAA) with the accession numbers PRJEB22110 and PRJEB22111.
DePristo, M. A. et al. A framework for variation discovery and genotyping using next-generation DNA sequencing data.
DePristo, M.A. et al. A framework for variation discovery and genotyping using next-generation DNA sequencing data.
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With the spread of DNA sequence data, models of DNA sequence evolution rapidly proliferated.
Recent common ancestry of human Y chromsomes: Evidence from DNA sequence data.
pp 151-179 in B. Weir (ed.), Statistical Analysis of DNA Sequence Data (Marcel Dekker: New York).
2003.Inter-familial relationships of the shorebirds (Aves: Charadriiformes) based on nuclear DNA sequence data.
The project started in April 2006, and collection of DNA sequence data was completed in 2011.
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