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The stained cells were analyzed by flow cytometry using DNA modeling software (ModFit LT4.0, Verity Software House, Topsham, ME, USA).
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Data were elaborated using Modfit (DNA Modelling System) software and expressed as fractions of cells in the different cycle phases.
Data were elaborated using Modfit (DNA Modelling System) software (Verity Software House Inc., Topsham, ME, USA) and expressed as fractions of cells in the different cell cycle phases.
DNA-bound crystallographic structure of APE1 was prepared for the docking studies using MOE molecular modeling software (http://www.chemcomp.com/).
Numerous population modeling software packages are available.
Coding for mixture models depends on the modeling software.
Based on the complete aligned data sets, we further conducted Maximum Likelihood (ML) tree reconstructions with the RAxML v7.2.6 software package [ 31- 33] with (1) a standard DNA model setups and (2) 13 mixed RNA/DNA model setups.
Data acquisition and analysis were performed using CELLQuest Pro software (Becton Dickinson, San Diego, CA, USA) and ModFit 2.0 (DNA Modelling System, Verity Software House, Inc., Topsham, ME, USA).
Enjoy your completed DNA model!
The sequences of the DNA strands making up a target structure are designed computationally, using molecular modeling and thermodynamic modeling software.
Models were generated using the Modeller software.
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