For DNA methylation data, aberrantly methylated peaks were detected between two samples.
Strong correlations existed between human and marmoset DNA methylation data.
G.N. provided project direction and acquisition and analysis of DNA methylation data.
Teschendorff, A.E. & Relton, C.L. Statistical and integrative system-level analysis of DNA methylation data.
H3K27me3, H3K9me2 and DNA methylation data were from published results8,53,59.
Assenov, Y. et al. Comprehensive analysis of DNA methylation data with RnBeads.
Mallona, I., Díez-Villanueva, A. & Peinado, M.A. Methylation plotter: a web tool for dynamic visualization of DNA methylation data.
Houseman, E.A. et al. Reference-free deconvolution of DNA methylation data and mediation by cell composition effects.
Burger, L., Gaidatzis, D., Schubeler, D. & Stadler, M. B. Identification of active regulatory regions from DNA methylation data.
UsingmRNA expression and DNA methylation data, we developed machine learning predictors capable of quantifying the stemness state of cells.
Based on these results, we applied our method to DNA methylation data from human blood from individuals of various ages.
