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Modern genetics, ecology and archaeology are combined to reconstruct the domestication and diversification of rice.
This human diversity may have hastened the early diversification of rice.
However, the role of introgression in the origin and diversification of rice is poorly understood, particularly with respect to the evolutionary fitness of genotypes resulting from introgression.
Thus, life history shift may not independently drive the increased diversification of rice species without habitat differentiations.
Newly developed model-based methods have been powerful tools for examining the diversification patterns of organisms and their underlying mechanisms (e.g. [ 18– 21]); these model-based methods can reveal the processes that fostered the diversification of rice and shaped spatial-temporal patterns of its diversity.
Similar(55)
Maize can be a viable alternative to rice and a potential driver for diversification of rice-wheat system.
These results suggest that selection based on human preference for rice grain characters had a great influence on the diversification of glutinous rice in Vietnam.
Further understanding of why there is apparently a pre-domestication tendency towards indica and japonica differentiation in wild rice is needed as this might shed light on the origin and diversification of domesticated rice.
This process, together with farmers' selection, has resulted in the great diversification of cultivated rice genepool.
Estimates of the codon usage indicated that the ENC for the same gene was similar across all species (χ2 test, P = 1.00) (Additional file 4), suggesting that the magnitude of codon bias underwent little change during the diversification of the rice tribe.
Genes preferentially expressed in certain tissues or stress treatments showed higher Ka/Ks values, suggesting that molecular selection occurred during the diversification of wheat and rice.
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