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The importance of noncoding RNA was emphasized in the Encyclopedia of DNA Elements (ENCODE) project, where it was revealed that the majority of the human genome consists of noncoding regions; however, diverse transcripts are produced from this region8,9.
More importantly, we were able to assign a number of these unigenes to a wide range of GO categories and COG classifications, indicating that diverse transcripts are involved in the cold response and which are represented in the sequence data of this species, and also reflecting the complexity of differential low temperature signal transcription in L. lancifolium.
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In conclusion, our systematic analysis of RNP composition sheds light on how diverse classes of transcripts are distinguished in the cell and provides insights into the functions of these transcripts and of key RNP proteins.
Recent experimental and computational studies have provided overwhelming evidence for a plethora of diverse transcripts that are unrelated to protein-coding genes.
To see whether the sequenced transcripts are functionally diverse or not, GO annotation was performed based on the BlastX hits against the NCBI nr database.
Furthermore, BMP 7 transcripts are present at diverse sites throughout development, in a pattern consistent with a role in a variety of inductive interactions.
Proteins encoded by these transcripts are predicted to have diverse molecular functions.
LncRNA transcripts are longer than 200 nucleotides with diverse emerging regulatory mechanisms.
Detailed analyses further suggest that antisense transcripts are independently regulated with respect to their sense transcripts, and diverse mechanisms might be potentially involved in the biogenesis and degradation of antisense RNAs.
An initial phase of open, inductive coding on a selection of rich, diverse and representative transcripts was conducted based in part on Grounded Theory [ 32].
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