The proposed measures and classification models were evaluated on the basis of computer experiments which were carried out on diverse set of benchmark datasets.
We have constructed a variety of GCNs for citrus, encompassing all of the probesets represented on the Affymetrix Citrus genome array (approximately 70% of the predicted transcriptome with reference to sweet orange), using datasets from a diverse set of experimental conditions.
We selected datasets for a diverse set of organisms to explore the impact of genome complexity and repeat content on error correction performance, from short genomes (E scherichia coli, P seudomonas syringae) to longer and more complex ones (D rosophila melanogaster, H omo sapiens).
Hence, in theory model trees can better adapt their structure to a diverse set of compounds, such as the Vss-target dataset used in this work.
The SLRG dataset contains a diverse set of genes that may be involved in other essential steps in the process of cell wall synthesis.
We developed the entire scoring function using a dataset of sequentially diverse set of 3988 protein chains with at most 25% pairwise sequence identity at least 2Å resolution, selected by the PISCES server [ 34].
DUD-E, an enhanced version of the DUD dataset [55], comprises a diverse set of 101 proteins including many pharmacologically important targets such as ion channels and GPCRs [56].
Using mouse data also allows more datasets, coming from a more diverse set of experiments [ 18].
We ran Protoss on the Astex dataset [18] which features a diverse set of protein structures with their associated ligands.
A diverse set of 1650 organic compounds were employed as the studied dataset, and a total of 1481 molecular descriptors were calculated for each compound.
