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In this case, traditional tracking algorithms may lead to the divergent estimation.
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Both methods provided divergent estimations on the temporal context of ariine diversification.
This illustrates that mapping against distant genome references leads to a significant under-estimation of divergence estimates, likely due to the fact that most divergent reads are missed.
Divergence time estimation of these two subpopulations, associated with an investigation of divergent loci that impede free gene flow, is currently underway in the laboratory to test this last hypothesis.
These two seemingly divergent approaches to area estimation are encompassed within the general framework of model-assisted estimation.
Divergent time among the mollusks was estimated using MCMCTree, which applied the Bayesian estimation method for species divergence43.
In addition, the use of genetically divergent grandparents in new studies would provide higher accuracy for estimation of QTL effects, also allowing the estimation of QTL gene frequencies.
The characteristics of these divergent duplicates (discussed above) are mapped onto individual phylogeny estimations (Figure 11).
It is only the ω estimations that are largely different for the divergent class between the two analyses (0.29 vs. 0.87).
Use of divergent reference samples for parental populations of admixed samples leads to estimation of admixture proportions that are biased towards equal proportions for all referent samples and estimation of generations since admixture that are upward biased.
This study was primarily focused on the bias in the linkage disequilibrium estimation of Ne when a population may include genetically divergent conspecifics.
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