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Two light-induced growth reactions in a unicellular cylindrical sporangiophore of Phycomyces blakesleeanus vertical growth acceleration under symmetrical irradiation (photomecism) and directional growth under unilateral irradiation (phototropism)—share common input light perception as well as common output growth mechanism but have strongly divergent dynamics and other distinctive features.
We observed that RNAPII and H3K27ac clusters with similar dynamics shared more genes than expected, while those with divergent dynamics shared fewer genes than expected (Fig 3B).
We found several divergent dynamics, which differ depending on the initial allelic frequencies of the central and/or radial components of the network.
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If the central bank mistakenly assumes private agents to have rational expectations when in fact they are learning, then policy rules frequently lead to divergent learning dynamics.
Rather it appears that phloem production in Ler ceases before xylem production and contributes to the divergent growth dynamics in the two genotypes.
Understanding and exploiting divergent cost dynamics might therefore hold the key to devising critical tests and assessing the relative evolutionary importance of different error processes.
The relative expression of transcripts and proteins within enriched pathways was at times divergent indicating dynamics in expression that would likely be better characterized in a time series exposure relative to a dose series.
The surprising discovery presented here was that such co-expression and probable co-regulation of related mRNA and proteins was observed even in cases with divergent mRNA-protein dynamics.
Thus, our analysis along a series of time points has revealed highly divergent secondary growth dynamics in the genotypes that would not have been evident from a comparison of end points.
For analysis we chose two common laboratory accessions, Columbia-0 (Col-0) and Landsberg erecta (Ler), which have already been shown to display divergent secondary growth dynamics (Ragni et al., 2011).
To test the effect of these divergent forces in the dynamics of gene expression, we have designed and constructed simple negatively auto-regulated gene circuits consisting of a basic regulator and transcriptional repressor module, and compared it with one, which has delayed repression.
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Justyna Jupowicz-Kozak
CEO of Professional Science Editing for Scientists @ prosciediting.com