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We also examined the effect of excluding synonymous changes, which at deeper levels in our taxon sample are subject both to saturation and to divergence in base composition, possibly obscuring phylogenetic signal.
Similar(59)
The observed mean dissimilarity implied significant divergence in communities based on neutral model analysis.
More recent higher resolution genomic scans of M S divergence in Mali based on genome resequencing (Lawniczak et al. 2010) and genotyping of more than 400,000 SNPs (Neafsey et al. 2010) have revealed additional regions of divergence dispersed along all chromosome arms in the genome that were missed by the original gene-based arrays.
It is often possible to attribute an apparent change in the rate of substitution to some other factor, such as misspecification of the substitution model, inaccurate divergence dates, changes in base composition, or a transient and locus-specific burst of adaptive changes.
This would seem to provide further evidence for the theory of Gross and Meyer [119] for a divergence in algal metabolism based on InDH, but the other P. tricornutum sequence (34720) was found within the clade formed by the red algal sequences.
Photosynthetic response to CO2 indicated divergence in photosynthetic capacity based on PEPcase activity, corroborated by activity quantification (both in vivo and in vitro) and distinct levels of carbon discrimination on different segments along leaf length.
Using the fully sequenced C. intestinalis A as an outgroup, we investigate the patterns of polymorphism and divergence in species B based on >1,500 cDNA sequences and >30,000 SNPs.
Based on these multiple lines of assessment, we present the first evidence for repeated ecologically relevant morphological divergences in sympatry based on a binary, sex-independent, and genetically determined color polymorphism.
Subgenotypes have been described within these HBV genotypes based on a divergence in the complete nucleotide sequence greater than 4% and less than 8% [4].
HBV as a highly variable virus is at least classified into eight genotypes based on a divergence in the entire nucleotide sequence greater than 8% [ 3- 21].
MOTUs were defined at cut-off values ranging from 0 to 14% sequence divergence in intervals of 1 base pair, on sequences from specimens for which all three genes were sequenced (nSSU*, nLSU* and COX1*).
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Justyna Jupowicz-Kozak
CEO of Professional Science Editing for Scientists @ prosciediting.com